Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898249.1_cds_XP_016448437.1_43090
CDS Infomation

[gene=LOC107773546] [db_xref=GeneID:107773546] [protein=zinc finger CCCH domain-containing protein 53-like isoform X2] [protein_id=XP_016448437.1] [location=complement(join(1273..1306,1399..1611,1813..1960,2042..2305,2398..2498,2590..2769,2859..3041,3411..3532))] [gbkey=CDS]
Sequence

ATGAAAGCCTTACAACAGCAGCAACAACAGAGGTTTGCTGCTGCTTCTCTTATGGCTTCT
GGTGCTCATCATCATCCACTTGCTTATAACAAGTGTATGAACATCTTGAATGATAACCAA
AGATCGGCTGCAGCAGCGTTTATGATGGGAGAAGAATTCCACAAATTTGGTCGATGCCGG
CCTGATAGAAGTGATTTTTCAGCAATGGCGATGGGCGGTATCTCAAATTCAAGTTCGCGA
CAGATTTACTTAACATTTCCTGCTGATAGCACATTTAAGGAGGAGGATGTGTCTAATTAC
TTTAGCATGTATGGGCCAGTTCAAGATGTTAGAATTCCGTATCAGCAGAAGCGCATGTTT
GGATTCGTTACGTTTGTCTACCCAGAAACTGTGAAGCTGATCTTGGCTAAAGGAAACCCT
CATTTTGTGTGTGATTCTCGTGTACTTGTCAAGCCCTACAAGGAAAAAGGAAAAGTCGCA
GACAAGAAGCAACTGCAACAACAGCATTCGATGGATAGAGGAGAGCTGTCGACATGTTTA
AGCCCATCAGCGCTTGAGTCTAGGGAGCCATATGACCTTCCCTTTGGAGCAGGAATGTTT
TATAATTCGCATGAGATGATGTTGAGAAGAAAATTAGAGCAGGAGGCTGAATTGCAGCAA
GCCATTGAACTTCAAGGCAGAAGGTTAATGAATTTGCAGCTGATGGACCTGAAGAATCAA
CACCGCAATGATCACTTCCCGTCAAGTCTCTCTGCTAGTCTTCCAACTGCTTCGGAGATG
CAGTTTCACTCTCAAAACAGTCATAGTCTTGTTCCTCTGTCTAATGGCATTGATGAAGAA
ATCCCTGCAGAAAATAACGATATCCATGAAGCTACCAAGGCCCCATATAATGCATCTGAT
GAGAAGGTGTCTCAGGAAATGCTGCCTAGCGATATTGGGAACGAGAACGGCAGCAAGGAG
CAGACCGCCAACACCGACGACTCTAATCTTCAAGAAAGCTTGGAGCACATCCTTCCTGAT
AACCTTTTTGCTTCTCCAACAAAGTCTGCTGCAGAACACCAGGCCTCATTCTCCACTGAT
TCAGCTGAAGCCGGCGTTAGATCCCCAATAACTACTACTACTACTACTACTTCTAACAAT
ATATCTATGCTTCCCACAACTTCTGCCCTCAACATGGCTTCTCTTAAATCTTGTTACTTC
CACATGCCAAGGTTTACTTCTGGGCAAGAAGCCATTGAAATGTAG

Peptide Sequence

PEP ID

XP_016448437.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform X2 [Nicotiana tabacum]
Sequence

MKALQQQQQQRFAAASLMASGAHHHPLAYNKCMNILNDNQRSAAAAFMMGEEFHKFGRCR
PDRSDFSAMAMGGISNSSSRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMF
GFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVADKKQLQQQHSMDRGELSTCL
SPSALESREPYDLPFGAGMFYNSHEMMLRRKLEQEAELQQAIELQGRRLMNLQLMDLKNQ
HRNDHFPSSLSASLPTASEMQFHSQNSHSLVPLSNGIDEEIPAENNDIHEATKAPYNASD
EKVSQEMLPSDIGNENGSKEQTANTDDSNLQESLEHILPDNLFASPTKSAAEHQASFSTD
SAEAGVRSPITTTTTTTSNNISMLPTTSALNMASLKSCYFHMPRFTSGQEAIEM

Transcript Sequence

Gene sequence data has not been registered.